NCPI FHIR Implementation Guide v2
0.1.0 - ci-build

NCPI FHIR Implementation Guide v2 - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: NCPI Metadata slices - TTL Representation

Draft as of 2024-11-25

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "metadata-elements"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem metadata-elements</b></p><a name=\"metadata-elements\"> </a><a name=\"hcmetadata-elements\"> </a><a name=\"metadata-elements-en-US\"> </a><p>This  code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig-2/CodeSystem/metadata-elements</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">AssayStrategy<a name=\"metadata-elements-AssayStrategy\"> </a></td><td>Assay strategy</td></tr><tr><td style=\"white-space:nowrap\">PlatformInstrument<a name=\"metadata-elements-PlatformInstrument\"> </a></td><td>Platform instrument</td></tr><tr><td style=\"white-space:nowrap\">RelatedSamples<a name=\"metadata-elements-RelatedSamples\"> </a></td><td>Related samples</td></tr><tr><td style=\"white-space:nowrap\">LibraryPrep<a name=\"metadata-elements-LibraryPrep\"> </a></td><td>Library preparation</td></tr><tr><td style=\"white-space:nowrap\">LibrarySelection<a name=\"metadata-elements-LibrarySelection\"> </a></td><td>Library selection</td></tr><tr><td style=\"white-space:nowrap\">Strandedness<a name=\"metadata-elements-Strandedness\"> </a></td><td>Strandedness</td></tr><tr><td style=\"white-space:nowrap\">TargetRegion<a name=\"metadata-elements-TargetRegion\"> </a></td><td>Target region</td></tr><tr><td style=\"white-space:nowrap\">ReferenceGenome<a name=\"metadata-elements-ReferenceGenome\"> </a></td><td>Reference genome</td></tr><tr><td style=\"white-space:nowrap\">IsPairedEnd<a name=\"metadata-elements-IsPairedEnd\"> </a></td><td>Is paired end</td></tr><tr><td style=\"white-space:nowrap\">WorkflowType<a name=\"metadata-elements-WorkflowType\"> </a></td><td>Workflow type</td></tr><tr><td style=\"white-space:nowrap\">WorkflowTool<a name=\"metadata-elements-WorkflowTool\"> </a></td><td>Workflow tool</td></tr><tr><td style=\"white-space:nowrap\">AdaptorTrimmed<a name=\"metadata-elements-AdaptorTrimmed\"> </a></td><td>Adaptor trimmed</td></tr></table></div>"
  ] ; # 
  fhir:url [ fhir:v "https://nih-ncpi.github.io/ncpi-fhir-ig-2/CodeSystem/metadata-elements"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "MetadataElements"] ; # 
  fhir:title [ fhir:v "NCPI Metadata slices"] ; # 
  fhir:status [ fhir:v "draft"] ; # 
  fhir:date [ fhir:v "2024-11-25T15:36:07+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "NCPI FHIR Working Group"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "NCPI FHIR Working Group" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://example.org/example-publisher" ]     ] [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "ncpi-fhir-ig@googlegroups.com" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "NCPI Metadata slices"] ; # 
  fhir:content [ fhir:v "complete"] ; # 
  fhir:count [ fhir:v "12"^^xsd:nonNegativeInteger] ; # 
  fhir:concept ( [
fhir:code [ fhir:v "AssayStrategy" ] ;
fhir:display [ fhir:v "Assay strategy" ]
  ] [
fhir:code [ fhir:v "PlatformInstrument" ] ;
fhir:display [ fhir:v "Platform instrument" ]
  ] [
fhir:code [ fhir:v "RelatedSamples" ] ;
fhir:display [ fhir:v "Related samples" ]
  ] [
fhir:code [ fhir:v "LibraryPrep" ] ;
fhir:display [ fhir:v "Library preparation" ]
  ] [
fhir:code [ fhir:v "LibrarySelection" ] ;
fhir:display [ fhir:v "Library selection" ]
  ] [
fhir:code [ fhir:v "Strandedness" ] ;
fhir:display [ fhir:v "Strandedness" ]
  ] [
fhir:code [ fhir:v "TargetRegion" ] ;
fhir:display [ fhir:v "Target region" ]
  ] [
fhir:code [ fhir:v "ReferenceGenome" ] ;
fhir:display [ fhir:v "Reference genome" ]
  ] [
fhir:code [ fhir:v "IsPairedEnd" ] ;
fhir:display [ fhir:v "Is paired end" ]
  ] [
fhir:code [ fhir:v "WorkflowType" ] ;
fhir:display [ fhir:v "Workflow type" ]
  ] [
fhir:code [ fhir:v "WorkflowTool" ] ;
fhir:display [ fhir:v "Workflow tool" ]
  ] [
fhir:code [ fhir:v "AdaptorTrimmed" ] ;
fhir:display [ fhir:v "Adaptor trimmed" ]
  ] ) . #