NCPI FHIR Implementation Guide v2
0.2.0 - ci-build

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: Example biospecimen based on data from CBTN - TTL Representation

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:Specimen ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "SA-000"] ; # 
  fhir:meta [
    ( fhir:profile [
fhir:v "https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/ncpi-sample"^^xsd:anyURI ;
fhir:l <https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/ncpi-sample>     ] )
  ] ; # 
  fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Specimen SA-000</b></p><a name=\"SA-000\"> </a><a name=\"hcSA-000\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-ncpi-sample.html\">NCPI Sample</a></p></div><p><b>Part of Study</b>: <a href=\"ResearchStudy-kf-research-study-cbtn.html\">ResearchStudy Children's Brain Tumor Network (CBTN)</a></p><p><b>identifier</b>: SA_RV52EY7S</p><p><b>type</b>: <span title=\"Codes:\">Peripheral Whole Blood</span></p><p><b>subject</b>: <a href=\"Patient-PT-006SP660.html\">Anonymous Patient (no stated gender), DoB Unknown ( https://cbtn.org/#C21156)</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>Method</b></td></tr><tr><td style=\"display: none\">*</td><td><code>Relative date time: </code></td><td><span title=\"Codes:{https://loinc.org LP125037-4}\">Blood Draw</span></td></tr></table><h3>Containers</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Identifier</b></td></tr><tr><td style=\"display: none\">*</td><td>BS_9QM8EXG3</td></tr></table></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:extension ( [
fhir:url [
fhir:v "https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/part-of-study"^^xsd:anyURI ;
fhir:l <https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/part-of-study>     ] ;
fhir:value [
a fhir:Reference ;
fhir:l fhir:ResearchStudy/kf-research-study-cbtn ;
fhir:reference [ fhir:v "ResearchStudy/kf-research-study-cbtn" ]     ]
  ] ) ; # 
  fhir:identifier ( [
fhir:value [ fhir:v "SA_RV52EY7S" ]
  ] ) ; # 
  fhir:type [
fhir:text [ fhir:v "Peripheral Whole Blood" ]
  ] ; # 
  fhir:subject [
fhir:l fhir:Patient/PT-006SP660 ;
fhir:reference [ fhir:v "Patient/PT-006SP660" ]
  ] ; # 
  fhir:collection [
fhir:collected [
a fhir:DateTime ;
      ( fhir:extension [
        ( fhir:extension [
fhir:url [
fhir:v "target"^^xsd:anyURI ;
fhir:l fhir:target           ] ;
fhir:value [
a fhir:Reference ;
fhir:l fhir:Patient/PT-006SP660 ;
fhir:reference [ fhir:v "Patient/PT-006SP660" ]           ]         ] [
fhir:url [
fhir:v "targetPath"^^xsd:anyURI ;
fhir:l fhir:targetPath           ] ;
fhir:value [
a fhir:String ;
fhir:v "None"           ]         ] [
fhir:url [
fhir:v "relationship"^^xsd:anyURI ;
fhir:l fhir:relationship           ] ;
fhir:value [
a fhir:Code ;
fhir:v "after"           ]         ] [
fhir:url [
fhir:v "offset"^^xsd:anyURI ;
fhir:l fhir:offset           ] ;
fhir:value [
a fhir:Duration ;
fhir:value [ fhir:v "4931"^^xsd:decimal ] ;
fhir:unit [ fhir:v "d" ] ;
fhir:system [
fhir:v "http://unitsofmeasure.org"^^xsd:anyURI ;
fhir:l <http://unitsofmeasure.org>             ] ;
fhir:code [ fhir:v "days" ]           ]         ] ) ;
fhir:url [
fhir:v "http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime"^^xsd:anyURI ;
fhir:l <http://hl7.org/fhir/StructureDefinition/cqf-relativeDateTime>         ]       ] )     ] ;
fhir:method [
      ( fhir:coding [
fhir:system [
fhir:v "https://loinc.org"^^xsd:anyURI ;
fhir:l <https://loinc.org>         ] ;
fhir:code [ fhir:v "LP125037-4" ]       ] ) ;
fhir:text [ fhir:v "Blood Draw" ]     ]
  ] ; # 
  fhir:container ( [
    ( fhir:identifier [
fhir:value [ fhir:v "BS_9QM8EXG3" ]     ] )
  ] ) . #