NCPI FHIR Implementation Guide v2
0.2.0 - ci-build

NCPI FHIR Implementation Guide v2 - Local Development build (v0.2.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Example biospecimen based on data from GREGoR, intentionally breaking the no parent and collection together rule. This should generate a warning. - XML Representation

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<Specimen xmlns="http://hl7.org/fhir">
  <id value="GSS123456-01-010x"/>
  <meta>
    <profile
             value="https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/ncpi-sample"/>
  </meta>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: Specimen GSS123456-01-010x</b></p><a name="GSS123456-01-010x"> </a><a name="hcGSS123456-01-010x"> </a><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px"/><p style="margin-bottom: 0px">Profile: <a href="StructureDefinition-ncpi-sample.html">NCPI Sample</a></p></div><p><b>Part of Study</b>: <a href="ResearchStudy-research-study-gregor.html">ResearchStudy: identifier = AnVIL_GREGoR_GSS_U08_GRU; status = completed</a></p><p><b>identifier</b>: GSS123456-s1</p><p><b>type</b>: <span title="Codes:">DNA</span></p><p><b>subject</b>: <a href="Patient-GSS123456.html">Anonymous Patient (no stated gender), DoB Unknown ( https://anvil.terra.bio/#GSS123456)</a></p><p><b>parent</b>: <a href="Specimen-GSS123456-01-010p.html">Specimen: extension = -&gt;ResearchStudy: identifier = AnVIL_GREGoR_GSS_U08_GRU; status = completed; identifier = GSS123456-s1; type = </a></p><h3>Collections</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Method</b></td></tr><tr><td style="display: none">*</td><td><span title="Codes:">DNA</span></td></tr></table></div>
  </text>
  <extension
             url="https://nih-ncpi.github.io/ncpi-fhir-ig-2/StructureDefinition/part-of-study">
    <valueReference>🔗 
      <reference value="ResearchStudy/research-study-gregor"/>
    </valueReference>
  </extension>
  <identifier>
    <value value="GSS123456-s1"/>
  </identifier>
  <type>
    <text value="DNA"/>
  </type>
  <subject>🔗 
    <reference value="Patient/GSS123456"/>
  </subject>
  <parent>🔗 
    <reference value="Specimen/GSS123456-01-010p"/>
  </parent>
  <collection>
    <method>
      <text value="DNA"/>
    </method>
  </collection>
</Specimen>