NCPI FHIR Implementation Guide - Local Development build (v0.2.0). See the Directory of published versions

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: Harmonized ValueSet for data table - XML Representation

Active as of 2022-12-09

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<ValueSet xmlns="http://hl7.org/fhir">
  <id value="datatable-mappings-valueset-1"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <code>https://uts.nlm.nih.gov/uts/umls</code><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C2348584</td><td>Subject Unique Identifier</td></tr><tr><td>C0079399</td><td>Gender</td></tr><tr><td>C168843</td><td>Age in Days at Enrollment</td></tr><tr><td>C1305855</td><td>Body mass index</td></tr><tr><td>C0872128</td><td>case control</td></tr></table></li><li>Include these codes as defined in <a href="http://loinc.org"><code>http://loinc.org</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="https://loinc.org/LP35925-4/">LP35925-4</a></td><td>Body mass index (BMI)</td></tr></table></li><li>Include these codes as defined in <a href="CodeSystem-hpo.html"><code>http://purl.obolibrary.org/obo/hp.owl</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="CodeSystem-hpo.html#hpo-HP.580010772">HP:0010772</a></td><td>Anomalous pulmonary venous return</td></tr></table></li><li>Include these codes as defined in <a href="CodeSystem-mondo.html"><code>http://purl.obolibrary.org/obo/mondo.owl</code></a><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="CodeSystem-mondo.html#mondo-0017705">0017705</a></td><td>congenital pulmonary venous return anomaly</td></tr><tr><td><a href="CodeSystem-mondo.html#mondo-0007130">0007130</a></td><td>congenital total pulmonary venous return anomaly</td></tr></table></li></ul></div>
  </text>
  <url
       value="https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1"/>
  <version value="0.2.0"/>
  <name value="ExampleStudyTableMappingsVS1"/>
  <title value="Harmonized ValueSet for data table"/>
  <status value="active"/>
  <date value="2022-12-09T17:30:30+00:00"/>
  <publisher value="NCPI FHIR Working Group"/>
  <contact>
    <name value="NCPI FHIR Working Group"/>
    <telecom>
      <system value="url"/>
      <value value="https://github.com/nih-ncpi"/>
    </telecom>
  </contact>
  <contact>
    <name value="Meen Chul Kim"/>
    <telecom>
      <system value="email"/>
      <value value="meenchul@d3b.center"/>
      <use value="work"/>
    </telecom>
  </contact>
  <description
               value="Public codes mapped from example dataset

The codes used below were chosen purely for example's sake and are in no way an endorsement or suggestion for terms that should be used in a real data-dictionary."/>
  <compose>
    <include>
      <system value="https://uts.nlm.nih.gov/uts/umls"/>
      <concept>
        <code value="C2348584"/>
        <display value="Subject Unique Identifier"/>
      </concept>
      <concept>
        <code value="C0079399"/>
        <display value="Gender"/>
      </concept>
      <concept>
        <code value="C168843"/>
        <display value="Age in Days at Enrollment"/>
      </concept>
      <concept>
        <code value="C1305855"/>
        <display value="Body mass index"/>
      </concept>
      <concept>
        <code value="C0872128"/>
        <display value="case control"/>
      </concept>
    </include>
    <include>
      <system value="http://loinc.org"/>
      <concept>
        <code value="LP35925-4"/>
        <display value="Body mass index (BMI)"/>
      </concept>
    </include>
    <include>
      <system value="http://purl.obolibrary.org/obo/hp.owl"/>
      <concept>
        <code value="HP:0010772"/>
        <display value="Anomalous pulmonary venous return"/>
      </concept>
    </include>
    <include>
      <system value="http://purl.obolibrary.org/obo/mondo.owl"/>
      <concept>
        <code value="0017705"/>
        <display value="congenital pulmonary venous return anomaly"/>
      </concept>
      <concept>
        <code value="0007130"/>
        <display value="congenital total pulmonary venous return anomaly"/>
      </concept>
    </include>
  </compose>
</ValueSet>