NCPI FHIR Implementation Guide
0.2.0 - ci-build

NCPI FHIR Implementation Guide - Local Development build (v0.2.0). See the Directory of published versions

: Condition Inheritance Pattern - JSON Representation

Active as of 2022-12-09

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{
  "resourceType" : "CodeSystem",
  "id" : "ConditionInheritanceMode",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This code system <code>https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style=\"white-space:nowrap\">GENO:0000143<a name=\"ConditionInheritanceMode-GENO.580000143\"> </a></td><td>Codominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000889<a name=\"ConditionInheritanceMode-GENO.580000889\"> </a></td><td>Unknown inheritance</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000892<a name=\"ConditionInheritanceMode-GENO.580000892\"> </a></td><td>Mitochondrial inheritance (primarily or exclusively heteroplasmic)</td></tr><tr><td style=\"white-space:nowrap\">GENO:0000893<a name=\"ConditionInheritanceMode-GENO.580000893\"> </a></td><td>Mitochondrial inheritance (primarily or exclusively homoplasmic)</td></tr><tr><td style=\"white-space:nowrap\">HP:0000006<a name=\"ConditionInheritanceMode-HP.580000006\"> </a></td><td>Autosomal dominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0000007<a name=\"ConditionInheritanceMode-HP.580000007\"> </a></td><td>Autosomal recessive inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001417<a name=\"ConditionInheritanceMode-HP.580001417\"> </a></td><td>X-linked inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001419<a name=\"ConditionInheritanceMode-HP.580001419\"> </a></td><td>X-linked inheritance (recessive)</td></tr><tr><td style=\"white-space:nowrap\">HP:0001423<a name=\"ConditionInheritanceMode-HP.580001423\"> </a></td><td>X-linked inheritance (dominant)</td></tr><tr><td style=\"white-space:nowrap\">HP:0001426<a name=\"ConditionInheritanceMode-HP.580001426\"> </a></td><td>Multifactorial inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001427<a name=\"ConditionInheritanceMode-HP.580001427\"> </a></td><td>Mitochondrial inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001428<a name=\"ConditionInheritanceMode-HP.580001428\"> </a></td><td>Somatic mutation</td></tr><tr><td style=\"white-space:nowrap\">HP:0001450<a name=\"ConditionInheritanceMode-HP.580001450\"> </a></td><td>Y-linked inheritance</td></tr><tr><td style=\"white-space:nowrap\">HP:0001470<a name=\"ConditionInheritanceMode-HP.580001470\"> </a></td><td>Autosomal dominant inheritance (sex-limited)</td></tr><tr><td style=\"white-space:nowrap\">HP:0003743<a name=\"ConditionInheritanceMode-HP.580003743\"> </a></td><td>Genetic anticipation</td></tr><tr><td style=\"white-space:nowrap\">HP:0003745<a name=\"ConditionInheritanceMode-HP.580003745\"> </a></td><td>Sporadic</td></tr><tr><td style=\"white-space:nowrap\">HP:0010983<a name=\"ConditionInheritanceMode-HP.580010983\"> </a></td><td>Oligogenic</td></tr><tr><td style=\"white-space:nowrap\">HP:0012274<a name=\"ConditionInheritanceMode-HP.580012274\"> </a></td><td>Autosomal dominant inheritance (with paternal imprinting)</td></tr><tr><td style=\"white-space:nowrap\">HP:0012275<a name=\"ConditionInheritanceMode-HP.580012275\"> </a></td><td>Autosomal dominant inheritance (with maternal imprinting)</td></tr><tr><td style=\"white-space:nowrap\">HP:0025352<a name=\"ConditionInheritanceMode-HP.580025352\"> </a></td><td>Autosomal dominant inheritance (primarily or exclusively de novo)</td></tr><tr><td style=\"white-space:nowrap\">HP:0031362<a name=\"ConditionInheritanceMode-HP.580031362\"> </a></td><td>Autosomal recessive inheritance (sex-limited)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97020<a name=\"ConditionInheritanceMode-SEPIO-CG.5897020\"> </a></td><td>Semidominant inheritance</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97021<a name=\"ConditionInheritanceMode-SEPIO-CG.5897021\"> </a></td><td>X-linked inheritance (primarily recessive with milder female expression)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97022<a name=\"ConditionInheritanceMode-SEPIO-CG.5897022\"> </a></td><td>Autosomal dominant inheritance (with genetic anticipation)</td></tr><tr><td style=\"white-space:nowrap\">SEPIO-CG:97023<a name=\"ConditionInheritanceMode-SEPIO-CG.5897023\"> </a></td><td>Autosomal recessive inheritance (with genetic anticipation)</td></tr></table></div>"
  },
  "url" : "https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ConditionInheritanceMode",
  "version" : "0.2.0",
  "name" : "ConditionInheritanceMode",
  "title" : "Condition Inheritance Pattern",
  "status" : "active",
  "date" : "2022-12-09T17:30:30+00:00",
  "publisher" : "NCPI FHIR Working Group",
  "contact" : [
    {
      "name" : "NCPI FHIR Working Group",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://github.com/nih-ncpi"
        }
      ]
    },
    {
      "name" : "Meen Chul Kim",
      "telecom" : [
        {
          "system" : "email",
          "value" : "meenchul@d3b.center",
          "use" : "work"
        }
      ]
    }
  ],
  "description" : "A set of terms that describe the transmission pattern of a condition in a pedigree.",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001"
        }
      ]
    }
  ],
  "content" : "complete",
  "count" : 25,
  "concept" : [
    {
      "code" : "GENO:0000143",
      "display" : "Codominant inheritance"
    },
    {
      "code" : "GENO:0000889",
      "display" : "Unknown inheritance"
    },
    {
      "code" : "GENO:0000892",
      "display" : "Mitochondrial inheritance (primarily or exclusively heteroplasmic)"
    },
    {
      "code" : "GENO:0000893",
      "display" : "Mitochondrial inheritance (primarily or exclusively homoplasmic)"
    },
    {
      "code" : "HP:0000006",
      "display" : "Autosomal dominant inheritance"
    },
    {
      "code" : "HP:0000007",
      "display" : "Autosomal recessive inheritance"
    },
    {
      "code" : "HP:0001417",
      "display" : "X-linked inheritance"
    },
    {
      "code" : "HP:0001419",
      "display" : "X-linked inheritance (recessive)"
    },
    {
      "code" : "HP:0001423",
      "display" : "X-linked inheritance (dominant)"
    },
    {
      "code" : "HP:0001426",
      "display" : "Multifactorial inheritance"
    },
    {
      "code" : "HP:0001427",
      "display" : "Mitochondrial inheritance"
    },
    {
      "code" : "HP:0001428",
      "display" : "Somatic mutation"
    },
    {
      "code" : "HP:0001450",
      "display" : "Y-linked inheritance"
    },
    {
      "code" : "HP:0001470",
      "display" : "Autosomal dominant inheritance (sex-limited)"
    },
    {
      "code" : "HP:0003743",
      "display" : "Genetic anticipation"
    },
    {
      "code" : "HP:0003745",
      "display" : "Sporadic"
    },
    {
      "code" : "HP:0010983",
      "display" : "Oligogenic"
    },
    {
      "code" : "HP:0012274",
      "display" : "Autosomal dominant inheritance (with paternal imprinting)"
    },
    {
      "code" : "HP:0012275",
      "display" : "Autosomal dominant inheritance (with maternal imprinting)"
    },
    {
      "code" : "HP:0025352",
      "display" : "Autosomal dominant inheritance (primarily or exclusively de novo)"
    },
    {
      "code" : "HP:0031362",
      "display" : "Autosomal recessive inheritance (sex-limited)"
    },
    {
      "code" : "SEPIO-CG:97020",
      "display" : "Semidominant inheritance"
    },
    {
      "code" : "SEPIO-CG:97021",
      "display" : "X-linked inheritance (primarily recessive with milder female expression)"
    },
    {
      "code" : "SEPIO-CG:97022",
      "display" : "Autosomal dominant inheritance (with genetic anticipation)"
    },
    {
      "code" : "SEPIO-CG:97023",
      "display" : "Autosomal recessive inheritance (with genetic anticipation)"
    }
  ]
}